Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921346.1_cds_XP_016470332.1_62795
CDS Infomation

[gene=LOC107792610] [db_xref=GeneID:107792610] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016470332.1] [location=join(101805..102420,102517..103415)] [gbkey=CDS]
Sequence

ATGACTTCGCCAAAAATTCAAAAGGATATTGTGAATGCTTGTGCACAAGAGACCGTGAAA
GCTATAATTGATGACCTAAATGGAGAATATTTTGGGATATTAGTTGATAAGTCCAAGGAT
ATTTCACACCATGAGCAAATGTCCCTTACTTTGCGGTATGTTGACAAAAAAGGCCAAGTG
AACGAGCCATTTATTGGTCTTGTTTGTGTTAGTGATACATCTGCAAAGTCATTGAAAGAA
GCAGTACTTTCTTTGCTAATGAAACACTCATTAAGTCCATCCAAAATATGTGGACAAGGA
TATGATGGGGCTAGTAATATGCAGGGAAAGATGAATGGTTTTAAAGCTTTAATTTTGCAA
GTAACTCCATCGGCATATTCCGTTCATTGTTTTGCTCATCAATTACAGCTGACGCTTGTA
GCTATTGCTAAAAAACACAAAGCGGTGGAGACTTTCTTTGCTATTATTACTAACGTATTG
AATGTGATTGGAGTTTATTTTAAATGTAGAGATCAACTTCGGAAACATCAAGCAGAATTG
TTGGAGCAATTGCTAGATAGTGGTGAAGTTCAAAGTGGAAAAGGATTAAATCAAGAGCGA
GGGCTTCAAAGGCCAGGTGATGTTAATGATAGGTTGCAAGCAGAAGCTTTTTCGAGTAAA
ATTAAAGCATTTAATTTTGTTTTCTTGCTTTACTTATTGTTGAAAGTGTTGATAATGTCA
AATGAGTTGAGCAAAGCATTACAGAAGAAAGAGCAAGATATTGTCAATGCCACGGTATTT
CTTGATATCACAAAGGAAAGGTTGCAGGAAATGAGAGATGAAGGATGGGAACCATTGATG
GATGAAGTATCTTCATTTTGTGCGAAACATGATATTTTGGTGCCCAAGATGGAAGAATTC
TATATTCCTGGAAAGTCGAAGCGTAAGCCTTTTAGTGTTACTTATTCACATCACTTACGT
GTTGAGCTTTTTTATGCAGTGATTGATTTGCAACTTCTGGAGCTAAATAGTCATTTTGAT
ATTGTGAGTAGTAACTTGCTTCTTGGTATGTCTAGTTTGAATCCGGCTAACTCATTTGCT
AATTTTGATAAGAAAAGAATAATGACATTGGCCAAGCATTATCCCGATGAGTTTGGTGAA
TTAAAGCTTCGAGATCTTAGTCGCCAACTTGACACTTTCATATGGCACATGCAACATGGT
GACCCTAGGTTCTCTGATTTGAAAGGAATTGGTGATTTGGCAAAAGCATTGGTTGAGGCA
AATCTTGTGGAGATTTATTCACTTCTTTATTTGCTTGTGAAGTTGAATTTAATTTTACAT
GTCACAACTGTAACGGTAGAAAGAGCATTCTCATCCATGAAGTACATCAAAGATGAATTG
CGTAGTATTATTAGTGATGCATTTTTAAATGATTGTTTAGTTTGTTACTTTGAGAAGGAA
GTATTTATAAATATAAGCAATGATGCTATTATTGACCGTTTTCAAAATATGAAAGCGCGC
CAAGTTCAACTATGA

Peptide Sequence

PEP ID

XP_016470332.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MTSPKIQKDIVNACAQETVKAIIDDLNGEYFGILVDKSKDISHHEQMSLTLRYVDKKGQV
NEPFIGLVCVSDTSAKSLKEAVLSLLMKHSLSPSKICGQGYDGASNMQGKMNGFKALILQ
VTPSAYSVHCFAHQLQLTLVAIAKKHKAVETFFAIITNVLNVIGVYFKCRDQLRKHQAEL
LEQLLDSGEVQSGKGLNQERGLQRPGDVNDRLQAEAFSSKIKAFNFVFLLYLLLKVLIMS
NELSKALQKKEQDIVNATVFLDITKERLQEMRDEGWEPLMDEVSSFCAKHDILVPKMEEF
YIPGKSKRKPFSVTYSHHLRVELFYAVIDLQLLELNSHFDIVSSNLLLGMSSLNPANSFA
NFDKKRIMTLAKHYPDEFGELKLRDLSRQLDTFIWHMQHGDPRFSDLKGIGDLAKALVEA
NLVEIYSLLYLLVKLNLILHVTTVTVERAFSSMKYIKDELRSIISDAFLNDCLVCYFEKE
VFINISNDAIIDRFQNMKARQVQL

Transcript Sequence

Gene sequence data has not been registered.